The "Derelict" map (8th small map, v1.05) is unique, in that, it does have phase lanes connecting 3 Stars (by outer planets). A lone 4th Star system is unconnected, as usual.
The "Foreign Invasion" meduim size map has a small group of outlieing, resource-rich planets that can only be reached by 2 wormholes. This small system is unique since it doesn't have a Star. Stars can always be reached from your local Star (after you've researched Long Range Jumps). Version 1.05's "Ancient Gifts" map is also unique.
To see entire maps quickly: start the map, then "surrender", and "keep playing", and you can instantly see the entire layout.