I tried Gauss Rail Gun, but it seem like waste of mana
People seem to get that impression, because its an instant 300/550/800 damage (depending upon level, reduced by sheild mitigation), and it only has a 6 second cooldown! So its easy to exhaust your mana in 12 seconds! Especially after jumping into a system, already reduced mana by 100.
The gun's usage of 75 Antimatter is not out of line, compared to other ships abilities. In fact, Flak Burst has a higher Antimatter cost (-100) with each use! Much like many TEC characteristics (and unlike Advent), its a simple, straightforward, easy to understand ability.